Some random changes to parallelism
I don't really remember what these changes were about, but it seems to run; have to look at parallelism stuff again in the future to get decent performance
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@ -3,16 +3,18 @@
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trap 'exit 130' INT
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wordlength=30
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sdenom=100
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sdenom=1
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sstart=1
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send=100
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send=1
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qdenom=100
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qstart=1
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qend=100 # 1/sqrt(2) = 0.7071...
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qend=200 # 1/sqrt(2) = 0.7071...
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#words="$(./billiard_words $wordlength | awk '{print $1}')"
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words="$(./billiard_words $wordlength | awk '{print $1}')"
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#words="cbabcabacabcacbcab cabacabcacbcabcbab cabcacbcabcbabcaba"
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words="abcb acbc baca"
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#words="abcabc abcb cbabcacbcacbab"
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#words="abcabc abcbcabcbc"
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#words="abcabc bcbab bcbabcac"
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for s in $(seq $sstart $send); do
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for q in $(seq $qstart $qend); do
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2
mat.h
2
mat.h
@ -12,7 +12,7 @@
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needed features:
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x multiply matrices
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- inverse
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- pseudoinverse
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x pseudoinverse
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x set
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- eigenvalues
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*/
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27
parallel.c
27
parallel.c
@ -10,7 +10,8 @@
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#include <malloc.h>
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#include <stdlib.h>
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#define DEBUG INFO
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//#define DEBUG INFO
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#define DEBUG(msg, ...)
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#define INFO(msg, ...) fprintf(stderr, "[%003d%10.3f] " msg, mpi_rank(0), runtime(), ##__VA_ARGS__)
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//#define DEBUG(msg, ...) fprintf(stderr, "[ %10.3f] " msg, runtime(), ##__VA_ARGS__)
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//#define DEBUG_MPI(msg, node, ...) fprintf(stderr, "[%003d%10.3f] " msg, node, runtime(), ##__VA_ARGS__)
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@ -128,8 +129,12 @@ int parallel_job(parallel_context *ctx, const void *global_data, void *node_data
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int message_present;
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if(block) {
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jobtime = -MPI_Wtime();
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MPI_Probe(0, MPI_ANY_TAG, MPI_COMM_WORLD,
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&status);
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jobtime += MPI_Wtime();
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INFO("TIMING: Probe() took %f seconds\n", jobtime);
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message_present = 1;
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} else {
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MPI_Iprobe(0, MPI_ANY_TAG, MPI_COMM_WORLD,
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@ -157,12 +162,16 @@ int parallel_job(parallel_context *ctx, const void *global_data, void *node_data
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jobtime += MPI_Wtime();
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DEBUG("Finished job %d in %f seconds\n", *job_nr, jobtime);
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INFO("TIMING: job %d took %f seconds\n", *job_nr, jobtime);
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*output_job_nr = *job_nr;
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jobtime = -MPI_Wtime();
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MPI_Send(output_and_job_nr,
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1, ctx->result_datatype,
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0, PARALLEL_RESULT, MPI_COMM_WORLD);
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jobtime += MPI_Wtime();
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INFO("TIMING: Send() took %f seconds\n", jobtime);
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}
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} else {
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result = 2;
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@ -359,13 +368,25 @@ int parallel_run(parallel_context *ctx, const void *global_data, const void *inp
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INFO("job %d completed by node %d, shut down, %d workers remaining\n", id, node, active_worker_nodes);
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}
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} else {
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INFO("job %d completed by node %d, continues with %d\n", id, node, current);
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*((int*)input_message_buffer) = current;
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memcpy(input_message_buffer + sizeof(int), input_array + current*ctx->input_size, ctx->input_size);
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MPI_Send(input_message_buffer, 1, ctx->order_datatype,
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node, PARALLEL_ORDER, MPI_COMM_WORLD);
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active_jobs[node]++;
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current++;
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if(active_jobs[node] < 3) {
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*((int*)input_message_buffer) = current;
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memcpy(input_message_buffer + sizeof(int), input_array + current*ctx->input_size, ctx->input_size);
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MPI_Send(input_message_buffer, 1, ctx->order_datatype,
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node, PARALLEL_ORDER, MPI_COMM_WORLD);
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active_jobs[node]++;
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current++;
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INFO("job %d completed by node %d, continues with %d and %d\n", id, node, current-1, current-2);
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} else {
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INFO("job %d completed by node %d, continues with %d\n", id, node, current-1);
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}
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}
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}
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}
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@ -6,4 +6,4 @@ nmax=700000 # up to reflection group word length 22 ( 444 group)
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#time mpirun --mca opal_warn_on_missing_libcuda 0 -x LD_LIBRARY_PATH=/home/stecker/svmpi/libs ./singular_values $nmax ejp_trg_restart test.out
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time mpirun --mca opal_warn_on_missing_libcuda 0 --mca mpi_yield_when_idle 1 -np 4 ./singular_values 700000 4 4 4 1 10 100 1 10 100
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time mpirun --mca opal_warn_on_missing_libcuda 0 --mca mpi_yield_when_idle 1 -np 4 ./singular_values 700000 4 4 4 1 1 100 1 100 100 $1
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